{
 "cells": [
  {
   "cell_type": "markdown",
   "id": "db95be89-6785-49a7-825a-f6669ffb9a0d",
   "metadata": {},
   "source": [
    "# Summary of model base parameters"
   ]
  },
  {
   "cell_type": "markdown",
   "id": "37b749af-96a6-425c-a5f7-b63cca1864af",
   "metadata": {},
   "source": [
    "Import libraries and read data"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 1,
   "id": "d57b015e-f3a8-49e8-86b7-77c46c9c8693",
   "metadata": {},
   "outputs": [],
   "source": [
    "import pandas as pd\n",
    "data = pd.read_csv('output/performance_base.csv')"
   ]
  },
  {
   "cell_type": "markdown",
   "id": "417b9471-b535-487b-98df-7f4a6dd73f9b",
   "metadata": {},
   "source": [
    "Get descriptive statistics, and save"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 2,
   "id": "80d716d2-6986-425a-970f-495768afe172",
   "metadata": {},
   "outputs": [],
   "source": [
    "stats = data.describe().T\n",
    "stats.to_csv('./output/base_parameters_stats.csv')"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 3,
   "id": "94a69565-7b98-4824-b841-0f790a9ea973",
   "metadata": {},
   "outputs": [
    {
     "data": {
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       "<div>\n",
       "<style scoped>\n",
       "    .dataframe tbody tr th:only-of-type {\n",
       "        vertical-align: middle;\n",
       "    }\n",
       "\n",
       "    .dataframe tbody tr th {\n",
       "        vertical-align: top;\n",
       "    }\n",
       "\n",
       "    .dataframe thead th {\n",
       "        text-align: right;\n",
       "    }\n",
       "</style>\n",
       "<table border=\"1\" class=\"dataframe\">\n",
       "  <thead>\n",
       "    <tr style=\"text-align: right;\">\n",
       "      <th></th>\n",
       "      <th>count</th>\n",
       "      <th>mean</th>\n",
       "      <th>std</th>\n",
       "      <th>min</th>\n",
       "      <th>25%</th>\n",
       "      <th>50%</th>\n",
       "      <th>75%</th>\n",
       "      <th>max</th>\n",
       "    </tr>\n",
       "  </thead>\n",
       "  <tbody>\n",
       "    <tr>\n",
       "      <th>thrombolysis_rate</th>\n",
       "      <td>132.0</td>\n",
       "      <td>0.114536</td>\n",
       "      <td>0.035449</td>\n",
       "      <td>0.015306</td>\n",
       "      <td>0.093239</td>\n",
       "      <td>0.109547</td>\n",
       "      <td>0.133314</td>\n",
       "      <td>0.243174</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>admissions</th>\n",
       "      <td>132.0</td>\n",
       "      <td>572.777778</td>\n",
       "      <td>277.416470</td>\n",
       "      <td>101.000000</td>\n",
       "      <td>377.666667</td>\n",
       "      <td>544.166667</td>\n",
       "      <td>755.083333</td>\n",
       "      <td>2039.333333</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>80_plus</th>\n",
       "      <td>132.0</td>\n",
       "      <td>0.425635</td>\n",
       "      <td>0.056416</td>\n",
       "      <td>0.292308</td>\n",
       "      <td>0.387089</td>\n",
       "      <td>0.427573</td>\n",
       "      <td>0.457896</td>\n",
       "      <td>0.576220</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>onset_known</th>\n",
       "      <td>132.0</td>\n",
       "      <td>0.665679</td>\n",
       "      <td>0.134064</td>\n",
       "      <td>0.344784</td>\n",
       "      <td>0.573593</td>\n",
       "      <td>0.641978</td>\n",
       "      <td>0.752881</td>\n",
       "      <td>0.988275</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>known_arrival_within_4hrs</th>\n",
       "      <td>132.0</td>\n",
       "      <td>0.600743</td>\n",
       "      <td>0.089733</td>\n",
       "      <td>0.257034</td>\n",
       "      <td>0.557876</td>\n",
       "      <td>0.608542</td>\n",
       "      <td>0.662325</td>\n",
       "      <td>0.813584</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>onset_arrival_mins_mu</th>\n",
       "      <td>132.0</td>\n",
       "      <td>4.571655</td>\n",
       "      <td>0.098500</td>\n",
       "      <td>3.767890</td>\n",
       "      <td>4.530071</td>\n",
       "      <td>4.579801</td>\n",
       "      <td>4.628630</td>\n",
       "      <td>4.763117</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>onset_arrival_mins_sigma</th>\n",
       "      <td>132.0</td>\n",
       "      <td>0.559729</td>\n",
       "      <td>0.121209</td>\n",
       "      <td>0.435067</td>\n",
       "      <td>0.516637</td>\n",
       "      <td>0.547310</td>\n",
       "      <td>0.585710</td>\n",
       "      <td>1.800721</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>scan_within_4_hrs</th>\n",
       "      <td>132.0</td>\n",
       "      <td>0.947503</td>\n",
       "      <td>0.030163</td>\n",
       "      <td>0.847328</td>\n",
       "      <td>0.932828</td>\n",
       "      <td>0.953808</td>\n",
       "      <td>0.969191</td>\n",
       "      <td>1.000000</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>arrival_scan_arrival_mins_mu</th>\n",
       "      <td>132.0</td>\n",
       "      <td>3.279822</td>\n",
       "      <td>0.409251</td>\n",
       "      <td>1.665700</td>\n",
       "      <td>3.029675</td>\n",
       "      <td>3.309899</td>\n",
       "      <td>3.572156</td>\n",
       "      <td>4.235924</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>arrival_scan_arrival_mins_sigma</th>\n",
       "      <td>132.0</td>\n",
       "      <td>0.941438</td>\n",
       "      <td>0.220601</td>\n",
       "      <td>0.549301</td>\n",
       "      <td>0.787521</td>\n",
       "      <td>0.890961</td>\n",
       "      <td>1.034230</td>\n",
       "      <td>1.751363</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>onset_scan_4_hrs</th>\n",
       "      <td>132.0</td>\n",
       "      <td>0.874621</td>\n",
       "      <td>0.043245</td>\n",
       "      <td>0.627178</td>\n",
       "      <td>0.852508</td>\n",
       "      <td>0.876833</td>\n",
       "      <td>0.904059</td>\n",
       "      <td>0.962230</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>eligable</th>\n",
       "      <td>132.0</td>\n",
       "      <td>0.338312</td>\n",
       "      <td>0.082637</td>\n",
       "      <td>0.111111</td>\n",
       "      <td>0.276355</td>\n",
       "      <td>0.331651</td>\n",
       "      <td>0.398860</td>\n",
       "      <td>0.531940</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>scan_needle_mins_mu</th>\n",
       "      <td>132.0</td>\n",
       "      <td>3.425993</td>\n",
       "      <td>0.342337</td>\n",
       "      <td>2.572714</td>\n",
       "      <td>3.204064</td>\n",
       "      <td>3.426290</td>\n",
       "      <td>3.676980</td>\n",
       "      <td>4.408589</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>scan_needle_mins_sigma</th>\n",
       "      <td>132.0</td>\n",
       "      <td>0.689888</td>\n",
       "      <td>0.156039</td>\n",
       "      <td>0.366017</td>\n",
       "      <td>0.579162</td>\n",
       "      <td>0.661771</td>\n",
       "      <td>0.793168</td>\n",
       "      <td>1.282829</td>\n",
       "    </tr>\n",
       "  </tbody>\n",
       "</table>\n",
       "</div>"
      ],
      "text/plain": [
       "                                 count        mean         std         min  \\\n",
       "thrombolysis_rate                132.0    0.114536    0.035449    0.015306   \n",
       "admissions                       132.0  572.777778  277.416470  101.000000   \n",
       "80_plus                          132.0    0.425635    0.056416    0.292308   \n",
       "onset_known                      132.0    0.665679    0.134064    0.344784   \n",
       "known_arrival_within_4hrs        132.0    0.600743    0.089733    0.257034   \n",
       "onset_arrival_mins_mu            132.0    4.571655    0.098500    3.767890   \n",
       "onset_arrival_mins_sigma         132.0    0.559729    0.121209    0.435067   \n",
       "scan_within_4_hrs                132.0    0.947503    0.030163    0.847328   \n",
       "arrival_scan_arrival_mins_mu     132.0    3.279822    0.409251    1.665700   \n",
       "arrival_scan_arrival_mins_sigma  132.0    0.941438    0.220601    0.549301   \n",
       "onset_scan_4_hrs                 132.0    0.874621    0.043245    0.627178   \n",
       "eligable                         132.0    0.338312    0.082637    0.111111   \n",
       "scan_needle_mins_mu              132.0    3.425993    0.342337    2.572714   \n",
       "scan_needle_mins_sigma           132.0    0.689888    0.156039    0.366017   \n",
       "\n",
       "                                        25%         50%         75%  \\\n",
       "thrombolysis_rate                  0.093239    0.109547    0.133314   \n",
       "admissions                       377.666667  544.166667  755.083333   \n",
       "80_plus                            0.387089    0.427573    0.457896   \n",
       "onset_known                        0.573593    0.641978    0.752881   \n",
       "known_arrival_within_4hrs          0.557876    0.608542    0.662325   \n",
       "onset_arrival_mins_mu              4.530071    4.579801    4.628630   \n",
       "onset_arrival_mins_sigma           0.516637    0.547310    0.585710   \n",
       "scan_within_4_hrs                  0.932828    0.953808    0.969191   \n",
       "arrival_scan_arrival_mins_mu       3.029675    3.309899    3.572156   \n",
       "arrival_scan_arrival_mins_sigma    0.787521    0.890961    1.034230   \n",
       "onset_scan_4_hrs                   0.852508    0.876833    0.904059   \n",
       "eligable                           0.276355    0.331651    0.398860   \n",
       "scan_needle_mins_mu                3.204064    3.426290    3.676980   \n",
       "scan_needle_mins_sigma             0.579162    0.661771    0.793168   \n",
       "\n",
       "                                         max  \n",
       "thrombolysis_rate                   0.243174  \n",
       "admissions                       2039.333333  \n",
       "80_plus                             0.576220  \n",
       "onset_known                         0.988275  \n",
       "known_arrival_within_4hrs           0.813584  \n",
       "onset_arrival_mins_mu               4.763117  \n",
       "onset_arrival_mins_sigma            1.800721  \n",
       "scan_within_4_hrs                   1.000000  \n",
       "arrival_scan_arrival_mins_mu        4.235924  \n",
       "arrival_scan_arrival_mins_sigma     1.751363  \n",
       "onset_scan_4_hrs                    0.962230  \n",
       "eligable                            0.531940  \n",
       "scan_needle_mins_mu                 4.408589  \n",
       "scan_needle_mins_sigma              1.282829  "
      ]
     },
     "execution_count": 3,
     "metadata": {},
     "output_type": "execute_result"
    }
   ],
   "source": [
    "stats"
   ]
  }
 ],
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